MEA × Spatial Browser

Select an experiment, review the automated tissue-segmentation pipeline and choose an alignment method (Snug-Fit Search or Generalized Procrustes), then explore co-registered MEA electrode activity alongside Visium spatial transcriptomics — mask overlays, voltage traces, gene expression, and lasso-based region comparison.

Add a new spatial transcriptomics experiment to the server. Upload a Visium tissue image and .cloupe file — the experiment becomes immediately available in the browser for co-registration and gene expression exploration.